My situation is really messed up and weird and I'm afraid they might look at it as being suspicious.

-I met my husband in Cz. Rep. We were classmates doing a prof. program together.
-I applied for Schengen D visa, was refused (some protocols were wrong)
-We had been cohabitating for over 6 months when I received my depature order (not deportation, didnt receive any ban).
-Left EU for 3 months (followed ALL the rules), we got married in July so we wouldn't have to be separated again.
-Two months later, my husband got a job offer in Italy.
-Now, he has to register and I have to apply for residency.
If you were an immigration officer, would you think this situation was suspicious?
Will they even know I got a departure order?